CDS

Accession Number TCMCG057C00139
gbkey CDS
Protein Id XP_018459031.1
Location join(743640..744020,744111..744296,744371..744455,744552..744699,744787..744867,745062..745233,745330..745489,745563..745666,745749..746048)
Gene LOC108829642
GeneID 108829642
Organism Raphanus sativus

Protein

Length 538aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018603529.1
Definition PREDICTED: protoporphyrinogen oxidase 1, chloroplastic [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category H
Description Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
KEGG_TC -
KEGG_Module M00121        [VIEW IN KEGG]
KEGG_Reaction R03222        [VIEW IN KEGG]
R04178        [VIEW IN KEGG]
KEGG_rclass RC00885        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00231        [VIEW IN KEGG]
EC 1.3.3.15        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
1.3.3.4        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00860        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00860        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004729        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006778        [VIEW IN EMBL-EBI]
GO:0006779        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009534        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016627        [VIEW IN EMBL-EBI]
GO:0016634        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031976        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0033013        [VIEW IN EMBL-EBI]
GO:0033014        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051188        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0070818        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTTATCTCTTCTCCGTCCGCAGCCGTTTCTATCTCCATTCTCAAATCCATTTCCTCGCTCGCGTCCTTACTACAAGCCTCTCAACCTCCACTGTTCCGTATCCGGCGGATCCGTCGTCGGCTCTTCCACAATCGAAGGCGGCGGAGGAGGAGGTAAAACCGTCGCGGCGGACTGCGTGATCGTCGGCGGAGGGATCAGCGGCCTGTGCATTGCGCAGGCGCTCGTGACGAAGCACCCGGACGCTGCGAAGAATGTGATAGTGACGGAGGCGAAGGACCGAGTCGGAGGGAATATCATCACACGAGAGGAGCAAGGTTTTCTATGGGAGGAAGGTCCCAATAGCTTCCAGCCGTCTGATCCTATGCTCACTATGGTGGTAGATAGTGGTTTGAAGGATGATTTAGTGTTGGGAGATCCTACTGCGCCGAGGTTTGTGTTGTGGAATGGGAAGCTGAGGCCAGTTCCGTCAAAGCTAACGGACTTGCCTTTCTTTGACTTGATGAGTATTCGAGGGAAGATTAGAGCTGGTTTTGGTGCCATTGGCATTCGACCTTCACCTCCGGGTCGTGAGGAATCTGTGGAAGAGTTTGTAAGGCGTAATCTTGGTGATGAGGTTTTTGAGCGCTTAATTGAACCTTTTTGTTCAGGTGTTTATGCGGGAGATCCTGCGAAACTGAGTATGAAAGCAGCGTTTGGGAAGGTTTGGAAACTAGAGGAGAATGGTGGAAGCATCATAGGTGGTGCTTTTAAGGCAATTCAAGCGAGGAATAAAGCTCCCAAGACAACCCGAGACCCGCGCCTGCCAAAGCCAAAGGGCCAAACTGTTGGTTCTTTCAGGAAAGGACTCACAATGCTGCCCGAGGCAATCTCTGCAAGGTTGGGTAACAAGGTGAAAGTTTCTTGGAAGCTCTCAAGTATCACTAAGCTGGCCAACGGAGAATATAGCTTAACCTACGAAACTCCAGAGGGAATAGTCACTGTACAGAGCAAAAGTGTTGTGATGACTGTGCCATCTCATGTTGCTAGTAGTCTCTTGCGCCCTCTTTCTGATTCTGCAGCTGAAGCGCTCTCAAAACTTTACTATCCACCAGTTGCAGCAGTATCCATCTCATACCCCAAAGAAGCAATCCGTAGCGAATGCTTAATAGATGGTGAACTAAAAGGATTCGGCCAGTTGCATCCGCGCACGCAAAAAGTGGAAACTCTTGGAACGATATACAGTTCATCGCTCTTTCCTAACCGAGCACCCCCTGGAAGAGTGTTGTTATTGAACTACATCGGTGGAACTACCAACACTGGGATCTTATCAAAGTCAGAAGGTGAGTTAGTGGAAGCAGTAGATAGAGACTTGAGGAAGATGCTGATAAAGCCAAGCTCGACCGATCCACTTGTACTTGGAGTAAGAGTATGGCCTCAAGCCATTCCTCAGTTCCTGATAGGTCACATTGATTTGGTAGACGCAGCGAAAGCATCTCTCTCGTCATCTGGTCACGAGGGCATATTCTTGGGTGGAAATTACGTTGCTGGTGTAGCATTGGGTCGGTGTGTGGAATGTGCTTATGAAACCGCGACTCAAGTGAACGATTTCATGTCGAGGTACACTTACAAGTAA
Protein:  
MDLSLLRPQPFLSPFSNPFPRSRPYYKPLNLHCSVSGGSVVGSSTIEGGGGGGKTVAADCVIVGGGISGLCIAQALVTKHPDAAKNVIVTEAKDRVGGNIITREEQGFLWEEGPNSFQPSDPMLTMVVDSGLKDDLVLGDPTAPRFVLWNGKLRPVPSKLTDLPFFDLMSIRGKIRAGFGAIGIRPSPPGREESVEEFVRRNLGDEVFERLIEPFCSGVYAGDPAKLSMKAAFGKVWKLEENGGSIIGGAFKAIQARNKAPKTTRDPRLPKPKGQTVGSFRKGLTMLPEAISARLGNKVKVSWKLSSITKLANGEYSLTYETPEGIVTVQSKSVVMTVPSHVASSLLRPLSDSAAEALSKLYYPPVAAVSISYPKEAIRSECLIDGELKGFGQLHPRTQKVETLGTIYSSSLFPNRAPPGRVLLLNYIGGTTNTGILSKSEGELVEAVDRDLRKMLIKPSSTDPLVLGVRVWPQAIPQFLIGHIDLVDAAKASLSSSGHEGIFLGGNYVAGVALGRCVECAYETATQVNDFMSRYTYK